Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.21■□□□□ 0.51
PCNAP12004 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNAP12004 AP001412.1-201ENST00000608405 714 ntBASIC18.21■□□□□ 0.51
PCNAP12004 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.21■□□□□ 0.51
PCNAP12004 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNAP12004 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNAP12004 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNAP12004 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PCNAP12004 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNAP12004 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.21■□□□□ 0.51
PCNAP12004 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNAP12004 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.21■□□□□ 0.51
PCNAP12004 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCNAP12004 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCNAP12004 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PCNAP12004 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCNAP12004 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCNAP12004 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.2■□□□□ 0.5
PCNAP12004 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.2■□□□□ 0.5
PCNAP12004 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.2■□□□□ 0.5
PCNAP12004 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.2■□□□□ 0.5
PCNAP12004 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
PCNAP12004 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.2■□□□□ 0.5
PCNAP12004 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.2■□□□□ 0.5
PCNAP12004 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.2■□□□□ 0.5
PCNAP12004 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.2■□□□□ 0.5
PCNAP12004 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PCNAP12004 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.2■□□□□ 0.5
PCNAP12004 AC130371.2-201ENST00000619443 611 ntBASIC18.2■□□□□ 0.5
PCNAP12004 AC113410.3-201ENST00000623366 203 ntBASIC18.2■□□□□ 0.5
PCNAP12004 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.2■□□□□ 0.5
PCNAP12004 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCNAP12004 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCNAP12004 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.2■□□□□ 0.5
PCNAP12004 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.2■□□□□ 0.5
PCNAP12004 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 FSCN1P1-201ENST00000568912 1481 ntBASIC18.2■□□□□ 0.5
PCNAP12004 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCNAP12004 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCNAP12004 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
PCNAP12004 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCNAP12004 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCNAP12004 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCNAP12004 AC012618.2-201ENST00000428058 849 ntBASIC18.19■□□□□ 0.5
PCNAP12004 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.19■□□□□ 0.5
PCNAP12004 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.19■□□□□ 0.5
PCNAP12004 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.19■□□□□ 0.5
PCNAP12004 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.19■□□□□ 0.5
PCNAP12004 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.19■□□□□ 0.5
PCNAP12004 AC083906.6-201ENST00000641366 219 ntBASIC18.19■□□□□ 0.5
PCNAP12004 AL049637.2-201ENST00000641778 930 ntBASIC18.19■□□□□ 0.5
PCNAP12004 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PCNAP12004 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
PCNAP12004 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.19■□□□□ 0.5
PCNAP12004 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PCNAP12004 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCNAP12004 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.18■□□□□ 0.5
PCNAP12004 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.18■□□□□ 0.5
PCNAP12004 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PCNAP12004 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.18■□□□□ 0.5
PCNAP12004 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCNAP12004 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCNAP12004 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCNAP12004 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms