Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.37■□□□□ 0.53
SP9P0CG40 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SP9P0CG40 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.37■□□□□ 0.53
SP9P0CG40 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SP9P0CG40 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SP9P0CG40 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SP9P0CG40 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SP9P0CG40 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SP9P0CG40 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.37■□□□□ 0.53
SP9P0CG40 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.37■□□□□ 0.53
SP9P0CG40 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.37■□□□□ 0.53
SP9P0CG40 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.37■□□□□ 0.53
SP9P0CG40 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SP9P0CG40 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SP9P0CG40 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
SP9P0CG40 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SP9P0CG40 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.37■□□□□ 0.53
SP9P0CG40 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SP9P0CG40 AL162377.1-201ENST00000618844 1793 ntBASIC18.37■□□□□ 0.53
SP9P0CG40 AL512408.1-201ENST00000569378 2000 ntBASIC18.37■□□□□ 0.53
SP9P0CG40 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SP9P0CG40 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.36■□□□□ 0.53
SP9P0CG40 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SP9P0CG40 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SP9P0CG40 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SP9P0CG40 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SP9P0CG40 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 AC004832.2-201ENST00000426397 482 ntBASIC18.36■□□□□ 0.53
SP9P0CG40 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SP9P0CG40 KRT18P28-201ENST00000453838 1332 ntBASIC18.36■□□□□ 0.53
SP9P0CG40 OR7E14P-202ENST00000530490 1290 ntBASIC18.36■□□□□ 0.53
SP9P0CG40 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
SP9P0CG40 AC012640.2-201ENST00000561606 901 ntBASIC18.36■□□□□ 0.53
SP9P0CG40 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SP9P0CG40 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SP9P0CG40 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SP9P0CG40 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.35■□□□□ 0.53
SP9P0CG40 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.35■□□□□ 0.53
SP9P0CG40 RNA5SP416-201ENST00000516838 111 ntBASIC18.35■□□□□ 0.53
SP9P0CG40 SART3-203ENST00000546611 1184 ntBASIC18.35■□□□□ 0.53
SP9P0CG40 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.35■□□□□ 0.53
SP9P0CG40 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SP9P0CG40 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SP9P0CG40 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.35■□□□□ 0.53
SP9P0CG40 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SP9P0CG40 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.34■□□□□ 0.53
SP9P0CG40 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SP9P0CG40 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SP9P0CG40 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.34■□□□□ 0.53
SP9P0CG40 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.34■□□□□ 0.53
SP9P0CG40 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.34■□□□□ 0.53
SP9P0CG40 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.34■□□□□ 0.53
SP9P0CG40 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.34■□□□□ 0.53
SP9P0CG40 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.34■□□□□ 0.53
SP9P0CG40 AC005336.2-201ENST00000593183 939 ntBASIC18.34■□□□□ 0.53
SP9P0CG40 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.34■□□□□ 0.53
SP9P0CG40 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.34■□□□□ 0.53
SP9P0CG40 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SP9P0CG40 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms