Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.39■□□□□ 0.53
CAPN1P07384 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CAPN1P07384 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CAPN1P07384 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN1P07384 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN1P07384 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN1P07384 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN1P07384 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN1P07384 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN1P07384 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN1P07384 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN1P07384 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN1P07384 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 NAPSB-206ENST00000562112 1266 ntBASIC18.38■□□□□ 0.53
CAPN1P07384 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.38■□□□□ 0.53
CAPN1P07384 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 RN7SL850P-201ENST00000579959 291 ntBASIC18.38■□□□□ 0.53
CAPN1P07384 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN1P07384 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN1P07384 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CAPN1P07384 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN1P07384 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 LINC01568-207ENST00000641790 1380 ntBASIC18.38■□□□□ 0.53
CAPN1P07384 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.38■□□□□ 0.53
CAPN1P07384 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN1P07384 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN1P07384 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CAPN1P07384 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN1P07384 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CAPN1P07384 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 AC005082.1-201ENST00000413042 2259 ntBASIC18.37■□□□□ 0.53
CAPN1P07384 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN1P07384 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN1P07384 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.37■□□□□ 0.53
CAPN1P07384 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN1P07384 AC131212.4-201ENST00000623606 975 ntBASIC18.37■□□□□ 0.53
CAPN1P07384 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.37■□□□□ 0.53
CAPN1P07384 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CAPN1P07384 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.37■□□□□ 0.53
CAPN1P07384 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CAPN1P07384 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CAPN1P07384 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CAPN1P07384 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN1P07384 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CAPN1P07384 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
CAPN1P07384 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CAPN1P07384 TMPOP1-202ENST00000424642 1267 ntBASIC18.36■□□□□ 0.53
CAPN1P07384 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms