Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.64■□□□□ 0.41
CLPTM1O96005 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.64■□□□□ 0.41
CLPTM1O96005 AL512625.2-201ENST00000417533 625 ntBASIC17.64■□□□□ 0.41
CLPTM1O96005 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.64■□□□□ 0.41
CLPTM1O96005 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.64■□□□□ 0.41
CLPTM1O96005 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.64■□□□□ 0.41
CLPTM1O96005 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.64■□□□□ 0.41
CLPTM1O96005 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.64■□□□□ 0.41
CLPTM1O96005 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.64■□□□□ 0.41
CLPTM1O96005 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.64■□□□□ 0.41
CLPTM1O96005 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLPTM1O96005 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.64■□□□□ 0.41
CLPTM1O96005 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLPTM1O96005 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.64■□□□□ 0.41
CLPTM1O96005 AC010980.2-201ENST00000587099 1412 ntBASIC17.64■□□□□ 0.41
CLPTM1O96005 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.63■□□□□ 0.41
CLPTM1O96005 AC135776.1-201ENST00000319817 2481 ntBASIC17.63■□□□□ 0.41
CLPTM1O96005 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CLPTM1O96005 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.63■□□□□ 0.41
CLPTM1O96005 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.63■□□□□ 0.41
CLPTM1O96005 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLPTM1O96005 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLPTM1O96005 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CLPTM1O96005 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 AL355472.2-201ENST00000422958 438 ntBASIC17.63■□□□□ 0.41
CLPTM1O96005 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.63■□□□□ 0.41
CLPTM1O96005 AL138781.1-201ENST00000566567 1274 ntBASIC17.63■□□□□ 0.41
CLPTM1O96005 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLPTM1O96005 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLPTM1O96005 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLPTM1O96005 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLPTM1O96005 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.62■□□□□ 0.41
CLPTM1O96005 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLPTM1O96005 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.62■□□□□ 0.41
CLPTM1O96005 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.62■□□□□ 0.41
CLPTM1O96005 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.62■□□□□ 0.41
CLPTM1O96005 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.62■□□□□ 0.41
CLPTM1O96005 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.62■□□□□ 0.41
CLPTM1O96005 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLPTM1O96005 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.62■□□□□ 0.41
CLPTM1O96005 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLPTM1O96005 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CLPTM1O96005 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLPTM1O96005 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CLPTM1O96005 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.61■□□□□ 0.41
CLPTM1O96005 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 AC018695.7-201ENST00000624587 2492 ntBASIC17.61■□□□□ 0.41
CLPTM1O96005 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLPTM1O96005 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.61■□□□□ 0.41
CLPTM1O96005 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLPTM1O96005 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CLPTM1O96005 MIPEPP3-201ENST00000412105 444 ntBASIC17.61■□□□□ 0.41
CLPTM1O96005 BX276092.2-201ENST00000417668 665 ntBASIC17.61■□□□□ 0.41
CLPTM1O96005 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLPTM1O96005 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.61■□□□□ 0.41
CLPTM1O96005 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLPTM1O96005 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.61■□□□□ 0.41
CLPTM1O96005 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.61■□□□□ 0.41
CLPTM1O96005 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms