Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 AL162741.1-201ENST00000565563 1558 ntBASIC20.95■□□□□ 0.94
GGPS1O95749 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 DUSP5P1-201ENST00000441325 1139 ntBASIC20.95■□□□□ 0.94
GGPS1O95749 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 KRT126P-201ENST00000549467 1181 ntBASIC20.95■□□□□ 0.94
GGPS1O95749 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.95■□□□□ 0.94
GGPS1O95749 AC068587.9-201ENST00000641814 219 ntBASIC20.95■□□□□ 0.94
GGPS1O95749 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 AC034236.2-201ENST00000606662 1610 ntBASIC20.95■□□□□ 0.94
GGPS1O95749 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 AC006333.2-201ENST00000607957 2099 ntBASIC20.95■□□□□ 0.94
GGPS1O95749 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GGPS1O95749 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.95■□□□□ 0.94
GGPS1O95749 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GGPS1O95749 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
GGPS1O95749 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.94■□□□□ 0.94
GGPS1O95749 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.94■□□□□ 0.94
GGPS1O95749 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.94■□□□□ 0.94
GGPS1O95749 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.94■□□□□ 0.94
GGPS1O95749 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
GGPS1O95749 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GGPS1O95749 CLEC4GP1-201ENST00000596555 870 ntBASIC20.94■□□□□ 0.94
GGPS1O95749 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.94■□□□□ 0.94
GGPS1O95749 NPAP1P7-201ENST00000613027 823 ntBASIC20.94■□□□□ 0.94
GGPS1O95749 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
GGPS1O95749 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.94■□□□□ 0.94
GGPS1O95749 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.94■□□□□ 0.94
GGPS1O95749 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GGPS1O95749 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.93■□□□□ 0.94
GGPS1O95749 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.93■□□□□ 0.94
GGPS1O95749 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GGPS1O95749 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
GGPS1O95749 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 AC092119.3-201ENST00000612618 583 ntBASIC20.93■□□□□ 0.94
GGPS1O95749 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.93■□□□□ 0.94
GGPS1O95749 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.93■□□□□ 0.94
GGPS1O95749 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.93■□□□□ 0.94
GGPS1O95749 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GGPS1O95749 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GGPS1O95749 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GGPS1O95749 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.93■□□□□ 0.94
GGPS1O95749 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.93■□□□□ 0.94
GGPS1O95749 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GGPS1O95749 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GGPS1O95749 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.92■□□□□ 0.94
GGPS1O95749 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
GGPS1O95749 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GGPS1O95749 MIR662-201ENST00000384847 95 ntBASIC20.92■□□□□ 0.94
GGPS1O95749 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.92■□□□□ 0.94
GGPS1O95749 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.92■□□□□ 0.94
GGPS1O95749 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.92■□□□□ 0.94
GGPS1O95749 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GGPS1O95749 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms