Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
MBD4O95243 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.3■■□□□ 1.16
MBD4O95243 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MBD4O95243 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MBD4O95243 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
MBD4O95243 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.29■■□□□ 1.16
MBD4O95243 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
MBD4O95243 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.29■■□□□ 1.16
MBD4O95243 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 AC104390.1-201ENST00000555663 520 ntBASIC22.29■■□□□ 1.16
MBD4O95243 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.29■■□□□ 1.16
MBD4O95243 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.29■■□□□ 1.16
MBD4O95243 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
MBD4O95243 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.29■■□□□ 1.16
MBD4O95243 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 KRT8P7-201ENST00000533003 1432 ntBASIC22.29■■□□□ 1.16
MBD4O95243 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MBD4O95243 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.29■■□□□ 1.16
MBD4O95243 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.29■■□□□ 1.16
MBD4O95243 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MBD4O95243 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
MBD4O95243 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.28■■□□□ 1.16
MBD4O95243 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MBD4O95243 AC092597.1-201ENST00000487352 616 ntBASIC22.28■■□□□ 1.16
MBD4O95243 AC034232.1-201ENST00000506026 1064 ntBASIC22.28■■□□□ 1.16
MBD4O95243 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.28■■□□□ 1.16
MBD4O95243 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.28■■□□□ 1.16
MBD4O95243 MIR3917-201ENST00000580971 93 ntBASIC22.28■■□□□ 1.16
MBD4O95243 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.28■■□□□ 1.16
MBD4O95243 AC010240.3-201ENST00000607688 395 ntBASIC22.28■■□□□ 1.16
MBD4O95243 AC083849.1-201ENST00000615227 514 ntBASIC22.28■■□□□ 1.16
MBD4O95243 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
MBD4O95243 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MBD4O95243 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
MBD4O95243 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.28■■□□□ 1.16
MBD4O95243 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.27■■□□□ 1.16
MBD4O95243 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.27■■□□□ 1.16
MBD4O95243 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.27■■□□□ 1.16
MBD4O95243 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.27■■□□□ 1.16
MBD4O95243 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
MBD4O95243 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.27■■□□□ 1.16
MBD4O95243 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.27■■□□□ 1.16
MBD4O95243 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.27■■□□□ 1.16
MBD4O95243 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.27■■□□□ 1.16
MBD4O95243 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.27■■□□□ 1.16
MBD4O95243 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
MBD4O95243 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.27■■□□□ 1.16
MBD4O95243 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MBD4O95243 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
MBD4O95243 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
MBD4O95243 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
MBD4O95243 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.26■■□□□ 1.15
MBD4O95243 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MBD4O95243 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.26■■□□□ 1.15
MBD4O95243 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.26■■□□□ 1.15
MBD4O95243 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MBD4O95243 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.26■■□□□ 1.15
MBD4O95243 KRT8P50-201ENST00000562022 1438 ntBASIC22.26■■□□□ 1.15
MBD4O95243 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.26■■□□□ 1.15
MBD4O95243 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
MBD4O95243 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MBD4O95243 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MBD4O95243 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
MBD4O95243 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.26■■□□□ 1.15
MBD4O95243 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MBD4O95243 LINC01311-201ENST00000565162 1445 ntBASIC22.25■■□□□ 1.15
MBD4O95243 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MBD4O95243 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MBD4O95243 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
MBD4O95243 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MBD4O95243 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MBD4O95243 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
MBD4O95243 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.25■■□□□ 1.15
MBD4O95243 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
MBD4O95243 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.25■■□□□ 1.15
MBD4O95243 AC079602.3-201ENST00000623931 403 ntBASIC22.25■■□□□ 1.15
MBD4O95243 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MBD4O95243 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MBD4O95243 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms