Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CR769767.2-201ENST00000622735 460 ntBASIC17.93■□□□□ 0.46
CPNE3O75131 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPNE3O75131 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CPNE3O75131 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE3O75131 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.92■□□□□ 0.46
CPNE3O75131 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.92■□□□□ 0.46
CPNE3O75131 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CPNE3O75131 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE3O75131 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.92■□□□□ 0.46
CPNE3O75131 UPK3BP1-201ENST00000428678 509 ntBASIC17.92■□□□□ 0.46
CPNE3O75131 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.92■□□□□ 0.46
CPNE3O75131 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE3O75131 AP000550.4-202ENST00000639755 178 ntBASIC17.92■□□□□ 0.46
CPNE3O75131 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE3O75131 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.92■□□□□ 0.46
CPNE3O75131 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE3O75131 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CPNE3O75131 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE3O75131 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CPNE3O75131 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 AC005082.1-201ENST00000413042 2259 ntBASIC17.92■□□□□ 0.46
CPNE3O75131 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE3O75131 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE3O75131 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE3O75131 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 Z82202.1-201ENST00000623446 1880 ntBASIC17.91■□□□□ 0.46
CPNE3O75131 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE3O75131 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.91■□□□□ 0.46
CPNE3O75131 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CPNE3O75131 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE3O75131 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE3O75131 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 AP000974.1-201ENST00000623909 2387 ntBASIC17.91■□□□□ 0.46
CPNE3O75131 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE3O75131 TNXA-203ENST00000507684 2038 ntBASIC17.91■□□□□ 0.46
CPNE3O75131 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 AC120498.9-201ENST00000339021 3867 ntBASIC17.91■□□□□ 0.46
CPNE3O75131 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE3O75131 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE3O75131 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE3O75131 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CPNE3O75131 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE3O75131 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 GCSHP2-201ENST00000560971 527 ntBASIC17.9■□□□□ 0.46
CPNE3O75131 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE3O75131 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
CPNE3O75131 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 AC125437.2-201ENST00000625180 2167 ntBASIC17.9■□□□□ 0.46
CPNE3O75131 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPNE3O75131 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE3O75131 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.89■□□□□ 0.46
CPNE3O75131 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CPNE3O75131 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE3O75131 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE3O75131 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE3O75131 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE3O75131 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms