Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AL031432.5-201ENST00000641059 760 ntBASIC17.51■□□□□ 0.39
CTNSO60931 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNSO60931 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTNSO60931 AL031598.1-201ENST00000561511 1773 ntBASIC17.51■□□□□ 0.39
CTNSO60931 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 TNXA-203ENST00000507684 2038 ntBASIC17.5■□□□□ 0.39
CTNSO60931 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTNSO60931 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 HOXB1-202ENST00000577092 1414 ntBASIC17.5■□□□□ 0.39
CTNSO60931 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNSO60931 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.5■□□□□ 0.39
CTNSO60931 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNSO60931 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.5■□□□□ 0.39
CTNSO60931 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNSO60931 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTNSO60931 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.5■□□□□ 0.39
CTNSO60931 KRT18P41-201ENST00000518924 1277 ntBASIC17.5■□□□□ 0.39
CTNSO60931 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNSO60931 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNSO60931 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNSO60931 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNSO60931 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTNSO60931 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNSO60931 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.49■□□□□ 0.39
CTNSO60931 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 KRT18P57-201ENST00000443599 1254 ntBASIC17.49■□□□□ 0.39
CTNSO60931 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTNSO60931 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 COX11P1-201ENST00000489116 835 ntBASIC17.49■□□□□ 0.39
CTNSO60931 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNSO60931 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNSO60931 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNSO60931 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNSO60931 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.49■□□□□ 0.39
CTNSO60931 AC140113.3-201ENST00000605663 199 ntBASIC17.49■□□□□ 0.39
CTNSO60931 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTNSO60931 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNSO60931 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTNSO60931 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTNSO60931 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CTNSO60931 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNSO60931 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CTNSO60931 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNSO60931 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTNSO60931 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNSO60931 KRT18P23-201ENST00000435622 1283 ntBASIC17.48■□□□□ 0.39
CTNSO60931 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.48■□□□□ 0.39
CTNSO60931 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CTNSO60931 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.48■□□□□ 0.39
CTNSO60931 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTNSO60931 AC112497.1-201ENST00000624824 639 ntBASIC17.48■□□□□ 0.39
CTNSO60931 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.48■□□□□ 0.39
CTNSO60931 MYC-208ENST00000641036 567 ntBASIC17.48■□□□□ 0.39
CTNSO60931 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms