Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.12■□□□□ 0.49
GFRA3O60609 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
GFRA3O60609 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.12■□□□□ 0.49
GFRA3O60609 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.12■□□□□ 0.49
GFRA3O60609 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.12■□□□□ 0.49
GFRA3O60609 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.12■□□□□ 0.49
GFRA3O60609 AC005225.4-201ENST00000557330 545 ntBASIC18.12■□□□□ 0.49
GFRA3O60609 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 HOXB1-202ENST00000577092 1414 ntBASIC18.12■□□□□ 0.49
GFRA3O60609 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.12■□□□□ 0.49
GFRA3O60609 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GFRA3O60609 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.12■□□□□ 0.49
GFRA3O60609 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GFRA3O60609 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.11■□□□□ 0.49
GFRA3O60609 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.11■□□□□ 0.49
GFRA3O60609 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.11■□□□□ 0.49
GFRA3O60609 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.11■□□□□ 0.49
GFRA3O60609 AC022494.1-201ENST00000466044 728 ntBASIC18.11■□□□□ 0.49
GFRA3O60609 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.11■□□□□ 0.49
GFRA3O60609 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.11■□□□□ 0.49
GFRA3O60609 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.11■□□□□ 0.49
GFRA3O60609 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GFRA3O60609 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
GFRA3O60609 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GFRA3O60609 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.11■□□□□ 0.49
GFRA3O60609 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 EP400NL-214ENST00000641289 2402 ntBASIC18.1■□□□□ 0.49
GFRA3O60609 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GFRA3O60609 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GFRA3O60609 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.1■□□□□ 0.49
GFRA3O60609 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.1■□□□□ 0.49
GFRA3O60609 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.1■□□□□ 0.49
GFRA3O60609 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.1■□□□□ 0.49
GFRA3O60609 CEND1P1-201ENST00000451006 455 ntBASIC18.1■□□□□ 0.49
GFRA3O60609 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.1■□□□□ 0.49
GFRA3O60609 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.1■□□□□ 0.49
GFRA3O60609 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.1■□□□□ 0.49
GFRA3O60609 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.1■□□□□ 0.49
GFRA3O60609 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.1■□□□□ 0.49
GFRA3O60609 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GFRA3O60609 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GFRA3O60609 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.09■□□□□ 0.49
GFRA3O60609 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GFRA3O60609 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
GFRA3O60609 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GFRA3O60609 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.09■□□□□ 0.49
GFRA3O60609 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.09■□□□□ 0.49
GFRA3O60609 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.09■□□□□ 0.49
GFRA3O60609 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.09■□□□□ 0.49
GFRA3O60609 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GFRA3O60609 AC004449.1-201ENST00000564240 433 ntBASIC18.09■□□□□ 0.49
GFRA3O60609 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.09■□□□□ 0.49
GFRA3O60609 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.09■□□□□ 0.49
GFRA3O60609 AC107918.4-202ENST00000641623 219 ntBASIC18.09■□□□□ 0.49
GFRA3O60609 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GFRA3O60609 ELL2P1-201ENST00000413990 1906 ntBASIC18.09■□□□□ 0.49
GFRA3O60609 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 KRT89P-201ENST00000620027 1478 ntBASIC18.08■□□□□ 0.49
GFRA3O60609 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.08■□□□□ 0.49
GFRA3O60609 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 PLK5-205ENST00000642079 1969 ntBASIC18.08■□□□□ 0.49
GFRA3O60609 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GFRA3O60609 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.08■□□□□ 0.48
GFRA3O60609 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFRA3O60609 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GFRA3O60609 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.08■□□□□ 0.48
GFRA3O60609 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.08■□□□□ 0.48
GFRA3O60609 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.08■□□□□ 0.48
GFRA3O60609 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.08■□□□□ 0.48
GFRA3O60609 AL078644.1-201ENST00000609881 752 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms