Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 KRT18P56-201ENST00000507275 550 ntBASIC19.07■□□□□ 0.64
SYNCRIPO60506 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 AC116407.4-201ENST00000623319 1061 ntBASIC19.07■□□□□ 0.64
SYNCRIPO60506 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNCRIPO60506 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 KRT8P3-201ENST00000519669 1449 ntBASIC19.07■□□□□ 0.64
SYNCRIPO60506 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SYNCRIPO60506 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 SPDYE15P-201ENST00000424157 909 ntBASIC19.06■□□□□ 0.64
SYNCRIPO60506 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.06■□□□□ 0.64
SYNCRIPO60506 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 MIR3180-5-201ENST00000583743 153 ntBASIC19.06■□□□□ 0.64
SYNCRIPO60506 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 AC069148.1-201ENST00000608741 768 ntBASIC19.06■□□□□ 0.64
SYNCRIPO60506 AC024243.1-201ENST00000609234 778 ntBASIC19.06■□□□□ 0.64
SYNCRIPO60506 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNCRIPO60506 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNCRIPO60506 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 AC083849.1-201ENST00000615227 514 ntBASIC19.05■□□□□ 0.64
SYNCRIPO60506 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNCRIPO60506 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNCRIPO60506 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNCRIPO60506 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SYNCRIPO60506 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNCRIPO60506 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYNCRIPO60506 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNCRIPO60506 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNCRIPO60506 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNCRIPO60506 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNCRIPO60506 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNCRIPO60506 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNCRIPO60506 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNCRIPO60506 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNCRIPO60506 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms