Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19■□□□□ 0.63
RIPK2O43353 POR-209ENST00000439269 1858 ntTSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RIPK2O43353 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 AL357033.4-201ENST00000617703 1807 ntBASIC19■□□□□ 0.63
RIPK2O43353 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19■□□□□ 0.63
RIPK2O43353 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RIPK2O43353 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.99■□□□□ 0.63
RIPK2O43353 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RIPK2O43353 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RIPK2O43353 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RIPK2O43353 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.99■□□□□ 0.63
RIPK2O43353 AC083906.2-201ENST00000511578 360 ntBASIC18.99■□□□□ 0.63
RIPK2O43353 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.99■□□□□ 0.63
RIPK2O43353 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.99■□□□□ 0.63
RIPK2O43353 SOX15-203ENST00000570788 1093 ntBASIC18.99■□□□□ 0.63
RIPK2O43353 REXO1L9P-201ENST00000604264 2108 ntBASIC18.99■□□□□ 0.63
RIPK2O43353 AL121832.2-201ENST00000610979 668 ntBASIC18.99■□□□□ 0.63
RIPK2O43353 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.99■□□□□ 0.63
RIPK2O43353 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.99■□□□□ 0.63
RIPK2O43353 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 PRORSD1P-202ENST00000563365 2154 ntBASIC18.99■□□□□ 0.63
RIPK2O43353 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
RIPK2O43353 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RIPK2O43353 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RIPK2O43353 AC012313.1-201ENST00000593393 3059 ntBASIC18.99■□□□□ 0.63
RIPK2O43353 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.99■□□□□ 0.63
RIPK2O43353 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RIPK2O43353 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
RIPK2O43353 AC008556.1-201ENST00000610908 2040 ntBASIC18.98■□□□□ 0.63
RIPK2O43353 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.98■□□□□ 0.63
RIPK2O43353 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.98■□□□□ 0.63
RIPK2O43353 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
RIPK2O43353 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RIPK2O43353 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.98■□□□□ 0.63
RIPK2O43353 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 AC097658.1-201ENST00000475555 843 ntBASIC18.98■□□□□ 0.63
RIPK2O43353 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.98■□□□□ 0.63
RIPK2O43353 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.98■□□□□ 0.63
RIPK2O43353 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.98■□□□□ 0.63
RIPK2O43353 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.98■□□□□ 0.63
RIPK2O43353 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RIPK2O43353 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RIPK2O43353 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RIPK2O43353 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RIPK2O43353 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 POU5F1P3-201ENST00000428824 1078 ntBASIC18.97■□□□□ 0.63
RIPK2O43353 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.97■□□□□ 0.63
RIPK2O43353 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.97■□□□□ 0.63
RIPK2O43353 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.97■□□□□ 0.63
RIPK2O43353 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.97■□□□□ 0.63
RIPK2O43353 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RIPK2O43353 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.97■□□□□ 0.63
RIPK2O43353 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RIPK2O43353 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
RIPK2O43353 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RIPK2O43353 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms