Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDX4O14627 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.98■□□□□ 0.47
CDX4O14627 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.98■□□□□ 0.47
CDX4O14627 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.98■□□□□ 0.47
CDX4O14627 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.98■□□□□ 0.47
CDX4O14627 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 AC145285.3-201ENST00000564603 959 ntBASIC17.98■□□□□ 0.47
CDX4O14627 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDX4O14627 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.98■□□□□ 0.47
CDX4O14627 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.98■□□□□ 0.47
CDX4O14627 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.98■□□□□ 0.47
CDX4O14627 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDX4O14627 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDX4O14627 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.97■□□□□ 0.47
CDX4O14627 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CDX4O14627 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CDX4O14627 RCN1P2-201ENST00000398357 915 ntBASIC17.97■□□□□ 0.47
CDX4O14627 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 UPF3AP3-201ENST00000420996 769 ntBASIC17.97■□□□□ 0.47
CDX4O14627 PMS2P2-201ENST00000425039 1128 ntBASIC17.97■□□□□ 0.47
CDX4O14627 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.97■□□□□ 0.47
CDX4O14627 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.97■□□□□ 0.47
CDX4O14627 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDX4O14627 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.97■□□□□ 0.47
CDX4O14627 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.97■□□□□ 0.47
CDX4O14627 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.97■□□□□ 0.47
CDX4O14627 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDX4O14627 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.97■□□□□ 0.47
CDX4O14627 AC022898.2-201ENST00000616822 1312 ntBASIC17.97■□□□□ 0.47
CDX4O14627 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDX4O14627 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDX4O14627 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CDX4O14627 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.96■□□□□ 0.47
CDX4O14627 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDX4O14627 RPS2P28-201ENST00000314255 741 ntBASIC17.96■□□□□ 0.47
CDX4O14627 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.96■□□□□ 0.47
CDX4O14627 IGHV3-22-201ENST00000520721 359 ntBASIC17.96■□□□□ 0.47
CDX4O14627 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.96■□□□□ 0.47
CDX4O14627 AC140113.2-201ENST00000604370 208 ntBASIC17.96■□□□□ 0.47
CDX4O14627 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.96■□□□□ 0.47
CDX4O14627 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.96■□□□□ 0.47
CDX4O14627 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDX4O14627 TEX21P-204ENST00000641479 1693 ntBASIC17.96■□□□□ 0.47
CDX4O14627 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
CDX4O14627 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CDX4O14627 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDX4O14627 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDX4O14627 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDX4O14627 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDX4O14627 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.95■□□□□ 0.46
CDX4O14627 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDX4O14627 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.95■□□□□ 0.46
CDX4O14627 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.95■□□□□ 0.46
CDX4O14627 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.95■□□□□ 0.46
CDX4O14627 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.95■□□□□ 0.46
CDX4O14627 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDX4O14627 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.95■□□□□ 0.46
CDX4O14627 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.95■□□□□ 0.46
CDX4O14627 MTDHP3-201ENST00000594186 672 ntBASIC17.95■□□□□ 0.46
CDX4O14627 AC027601.4-201ENST00000611259 610 ntBASIC17.95■□□□□ 0.46
CDX4O14627 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDX4O14627 AC104109.2-201ENST00000602919 1418 ntBASIC17.95■□□□□ 0.46
CDX4O14627 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDX4O14627 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.95■□□□□ 0.46
CDX4O14627 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.95■□□□□ 0.46
CDX4O14627 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.95■□□□□ 0.46
CDX4O14627 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDX4O14627 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.95■□□□□ 0.46
CDX4O14627 Z82202.1-201ENST00000623446 1880 ntBASIC17.95■□□□□ 0.46
CDX4O14627 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDX4O14627 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDX4O14627 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms