Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC188H7C350 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC188H7C350 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC188H7C350 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC188H7C350 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC188H7C350 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC188H7C350 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC188H7C350 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 AC006970.2-201ENST00000450065 779 ntBASIC19.45■□□□□ 0.7
CCDC188H7C350 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC188H7C350 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC188H7C350 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC188H7C350 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC188H7C350 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 AC004264.1-201ENST00000608354 794 ntBASIC19.45■□□□□ 0.7
CCDC188H7C350 NBPF21P-201ENST00000425093 1451 ntBASIC19.45■□□□□ 0.7
CCDC188H7C350 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC188H7C350 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC188H7C350 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC188H7C350 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC188H7C350 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC188H7C350 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC188H7C350 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC188H7C350 AL357033.4-201ENST00000617703 1807 ntBASIC19.44■□□□□ 0.7
CCDC188H7C350 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC188H7C350 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC188H7C350 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC188H7C350 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC188H7C350 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC188H7C350 TSPY6P-201ENST00000448518 926 ntBASIC19.44■□□□□ 0.7
CCDC188H7C350 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC188H7C350 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC188H7C350 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC188H7C350 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC188H7C350 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC188H7C350 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC188H7C350 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC188H7C350 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC188H7C350 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC188H7C350 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC188H7C350 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC188H7C350 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC188H7C350 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC188H7C350 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC188H7C350 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC188H7C350 AC008556.1-201ENST00000610908 2040 ntBASIC19.42■□□□□ 0.7
CCDC188H7C350 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC188H7C350 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC188H7C350 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC188H7C350 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC188H7C350 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC188H7C350 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC188H7C350 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC188H7C350 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC188H7C350 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC188H7C350 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC188H7C350 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC188H7C350 AC083880.1-201ENST00000608266 535 ntBASIC19.42■□□□□ 0.7
CCDC188H7C350 IKBKGP1-201ENST00000612193 1073 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms