Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CFAP99D6REC4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CFAP99D6REC4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP99D6REC4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP99D6REC4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP99D6REC4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 AC087499.1-201ENST00000418141 1075 ntBASIC18.63■□□□□ 0.57
CFAP99D6REC4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 AL353719.1-201ENST00000566847 864 ntBASIC18.63■□□□□ 0.57
CFAP99D6REC4 AL023803.3-201ENST00000615559 522 ntBASIC18.63■□□□□ 0.57
CFAP99D6REC4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP99D6REC4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP99D6REC4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 KRT8P9-201ENST00000558927 1449 ntBASIC18.63■□□□□ 0.57
CFAP99D6REC4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP99D6REC4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CFAP99D6REC4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CFAP99D6REC4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 AC010947.1-201ENST00000623454 693 ntBASIC18.62■□□□□ 0.57
CFAP99D6REC4 AC010653.2-201ENST00000623505 997 ntBASIC18.62■□□□□ 0.57
CFAP99D6REC4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.62■□□□□ 0.57
CFAP99D6REC4 KRT8P32-201ENST00000512863 1461 ntBASIC18.62■□□□□ 0.57
CFAP99D6REC4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CFAP99D6REC4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CFAP99D6REC4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.61■□□□□ 0.57
CFAP99D6REC4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 AC092338.2-201ENST00000568827 1415 ntBASIC18.61■□□□□ 0.57
CFAP99D6REC4 LINC01568-207ENST00000641790 1380 ntBASIC18.61■□□□□ 0.57
CFAP99D6REC4 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 MCCD1P1-208ENST00000445732 328 ntBASIC18.61■□□□□ 0.57
CFAP99D6REC4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CFAP99D6REC4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CFAP99D6REC4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms