Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC85CA6NKD9 AP001271.2-201ENST00000624018 1556 ntBASIC20.64■□□□□ 0.9
CCDC85CA6NKD9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 AL139288.1-201ENST00000623748 933 ntBASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85CA6NKD9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 AC002472.2-201ENST00000442739 958 ntBASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 FAM86GP-201ENST00000448322 971 ntBASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 AC093520.2-201ENST00000561830 333 ntBASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 NKAPP1-205ENST00000585790 367 ntBASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC85CA6NKD9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 HOXB1-202ENST00000577092 1414 ntBASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 SLC25A6P5-201ENST00000435663 894 ntBASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 AP000344.2-201ENST00000512987 629 ntBASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 AC018845.2-201ENST00000568326 409 ntBASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC85CA6NKD9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 LAGE3P1-201ENST00000425356 484 ntBASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 AP000867.4-201ENST00000641616 219 ntBASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 GPR89P-201ENST00000407924 1495 ntBASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC85CA6NKD9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.6■□□□□ 0.89
CCDC85CA6NKD9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85CA6NKD9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC85CA6NKD9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85CA6NKD9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85CA6NKD9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85CA6NKD9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC85CA6NKD9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms