Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 TSPY14P-201ENST00000303979 915 ntBASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 MFAP1P1-201ENST00000442257 1255 ntBASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 ECEL1P2-202ENST00000465689 757 ntBASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.04■□□□□ -0
TCRBV4S1A1TA0A5B7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 TERF1P1-201ENST00000311003 1181 ntBASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 ARMC10P1-201ENST00000313754 855 ntBASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 AC091390.4-202ENST00000476426 537 ntBASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 AL590326.2-201ENST00000625139 305 ntBASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.03■□□□□ -0
TCRBV4S1A1TA0A5B7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 AC009113.1-201ENST00000570267 2443 ntBASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 CCR12P-201ENST00000446203 998 ntBASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 AC008040.2-201ENST00000461049 708 ntBASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 AC116562.4-202ENST00000641738 218 ntBASIC15.02■□□□□ -0
TCRBV4S1A1TA0A5B7 WIZP1-201ENST00000531444 2299 ntBASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TCRBV4S1A1TA0A5B7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC104581.1-202ENST00000635932 2618 ntBASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC090164.3-201ENST00000610780 2143 ntBASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms