Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3DA0A087WVF3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3DA0A087WVF3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3DA0A087WVF3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 HLA-F-220ENST00000434407 884 ntBASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 AL121672.3-201ENST00000608644 468 ntBASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 AL162741.1-201ENST00000565563 1558 ntBASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.59■□□□□ 0.57
TBC1D3DA0A087WVF3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 AC006333.2-201ENST00000607957 2099 ntBASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3DA0A087WVF3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 AC092119.3-201ENST00000612618 583 ntBASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3DA0A087WVF3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 TSSC2-201ENST00000450217 709 ntBASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3DA0A087WVF3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms