Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A3BPQ9Y5P4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A3BPQ9Y5P4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.93■□□□□ 0.94
COL4A3BPQ9Y5P4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 AL138781.2-201ENST00000617896 1843 ntBASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 AK4P3-201ENST00000418260 669 ntBASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 KRT18P35-201ENST00000510488 1269 ntBASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 MIR4674-201ENST00000582457 87 ntBASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 AC139887.4-201ENST00000607877 719 ntBASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 AC008622.2-201ENST00000617006 1229 ntBASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A3BPQ9Y5P4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A3BPQ9Y5P4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 COX11P1-201ENST00000489116 835 ntBASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 AL512353.2-201ENST00000448759 1962 ntBASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
COL4A3BPQ9Y5P4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A3BPQ9Y5P4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL4A3BPQ9Y5P4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.89■□□□□ 0.94
COL4A3BPQ9Y5P4 KRT8P32-201ENST00000512863 1461 ntBASIC20.89■□□□□ 0.94
COL4A3BPQ9Y5P4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 YBX1P2-201ENST00000489612 999 ntBASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.89■□□□□ 0.93
COL4A3BPQ9Y5P4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms