Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 AC096733.2-201ENST00000609937 1394 ntBASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 AL031598.1-201ENST00000561511 1773 ntBASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 KRT18P56-201ENST00000507275 550 ntBASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB1Q9Y5F3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 AL138781.2-201ENST00000617896 1843 ntBASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB1Q9Y5F3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 TSPY5P-201ENST00000426936 936 ntBASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 AC092647.4-201ENST00000457211 535 ntBASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 AL512353.2-201ENST00000448759 1962 ntBASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB1Q9Y5F3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms