Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 ATP5G2P1-201ENST00000433580 426 ntBASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NOTCH3Q9UM47 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AC009078.2-202ENST00000463353 338 ntBASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AC023511.2-201ENST00000618803 211 ntBASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AC104417.2-201ENST00000562989 1793 ntBASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 AL162377.1-201ENST00000618844 1793 ntBASIC14.43□□□□□ -0.1
NOTCH3Q9UM47 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 SPDYE13P-201ENST00000445314 798 ntBASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NOTCH3Q9UM47 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NOTCH3Q9UM47 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms