Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TLR9Q9NR96 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.83■□□□□ 0.77
TLR9Q9NR96 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.83■□□□□ 0.77
TLR9Q9NR96 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.83■□□□□ 0.77
TLR9Q9NR96 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.83■□□□□ 0.77
TLR9Q9NR96 AL662844.1-201ENST00000546340 181 ntBASIC19.83■□□□□ 0.77
TLR9Q9NR96 SLC25A6P4-201ENST00000586535 553 ntBASIC19.83■□□□□ 0.77
TLR9Q9NR96 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.83■□□□□ 0.77
TLR9Q9NR96 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.83■□□□□ 0.77
TLR9Q9NR96 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.83■□□□□ 0.76
TLR9Q9NR96 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TLR9Q9NR96 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.83■□□□□ 0.76
TLR9Q9NR96 LINC00167-201ENST00000530583 1419 ntBASIC19.83■□□□□ 0.76
TLR9Q9NR96 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
TLR9Q9NR96 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TLR9Q9NR96 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TLR9Q9NR96 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TLR9Q9NR96 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.83■□□□□ 0.76
TLR9Q9NR96 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.83■□□□□ 0.76
TLR9Q9NR96 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TLR9Q9NR96 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TLR9Q9NR96 AC233702.3-201ENST00000578656 1387 ntBASIC19.83■□□□□ 0.76
TLR9Q9NR96 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 Z69720.1-201ENST00000601483 472 ntBASIC19.82■□□□□ 0.76
TLR9Q9NR96 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.82■□□□□ 0.76
TLR9Q9NR96 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TLR9Q9NR96 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 AC079776.4-201ENST00000511039 504 ntBASIC19.81■□□□□ 0.76
TLR9Q9NR96 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 AC099336.1-202ENST00000602961 463 ntBASIC19.81■□□□□ 0.76
TLR9Q9NR96 AL121912.1-201ENST00000603683 238 ntBASIC19.81■□□□□ 0.76
TLR9Q9NR96 AL353801.3-201ENST00000609898 542 ntBASIC19.81■□□□□ 0.76
TLR9Q9NR96 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.81■□□□□ 0.76
TLR9Q9NR96 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TLR9Q9NR96 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 MIR564-202ENST00000385049 94 ntBASIC19.8■□□□□ 0.76
TLR9Q9NR96 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TLR9Q9NR96 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.8■□□□□ 0.76
TLR9Q9NR96 GPR32P1-201ENST00000601788 811 ntBASIC19.8■□□□□ 0.76
TLR9Q9NR96 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms