Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDLIM7Q9NR12 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 LINC00265-3P-201ENST00000447588 903 ntBASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 KRT18P31-201ENST00000506277 1292 ntBASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 AC079776.4-201ENST00000511039 504 ntBASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 FOSL1P1-201ENST00000511041 816 ntBASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 GPAT2P1-201ENST00000444924 1672 ntBASIC20.93■□□□□ 0.94
PDLIM7Q9NR12 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 AL023284.2-201ENST00000405850 579 ntBASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 TSPY22P-201ENST00000427496 604 ntBASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 HLA-F-220ENST00000434407 884 ntBASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 AL671883.3-201ENST00000603274 991 ntBASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDLIM7Q9NR12 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 LINC01711-201ENST00000598340 967 ntBASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.91■□□□□ 0.94
PDLIM7Q9NR12 AL161938.1-201ENST00000569833 2180 ntBASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 AL512353.2-201ENST00000448759 1962 ntBASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 MRPL3P1-201ENST00000400109 1033 ntBASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 AL662844.1-201ENST00000546340 181 ntBASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 AC012615.1-201ENST00000565797 1299 ntBASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDLIM7Q9NR12 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDLIM7Q9NR12 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PDLIM7Q9NR12 AC036111.1-201ENST00000533973 1582 ntBASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms