Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 AC005104.2-201ENST00000427818 678 ntBASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 AC018712.1-201ENST00000455767 687 ntBASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 AC006333.2-201ENST00000607957 2099 ntBASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZFYVE28Q9HCC9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 AC132008.2-207ENST00000454517 770 ntBASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 AC073648.2-201ENST00000510116 352 ntBASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.34■■□□□ 1.01
ZFYVE28Q9HCC9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 AC096582.2-201ENST00000510860 516 ntBASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 AL049840.3-201ENST00000602669 611 ntBASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 MIR7706-201ENST00000613747 67 ntBASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 AC114341.1-201ENST00000618070 349 ntBASIC21.33■■□□□ 1.01
ZFYVE28Q9HCC9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
ZFYVE28Q9HCC9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZFYVE28Q9HCC9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.33■■□□□ 1
ZFYVE28Q9HCC9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
ZFYVE28Q9HCC9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms