Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.21■□□□□ 0.83
NXF3Q9H4D5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 HLA-F-220ENST00000434407 884 ntBASIC20.2■□□□□ 0.82
NXF3Q9H4D5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 AL136038.4-201ENST00000603606 1261 ntBASIC20.2■□□□□ 0.82
NXF3Q9H4D5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 Z98044.1-201ENST00000632503 1764 ntBASIC20.2■□□□□ 0.82
NXF3Q9H4D5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 AL391807.1-203ENST00000604392 2365 ntBASIC20.2■□□□□ 0.82
NXF3Q9H4D5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NXF3Q9H4D5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.19■□□□□ 0.82
NXF3Q9H4D5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NXF3Q9H4D5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NXF3Q9H4D5 SLC25A24-204ENST00000569674 2357 ntBASIC20.17■□□□□ 0.82
NXF3Q9H4D5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NXF3Q9H4D5 AL162741.1-201ENST00000565563 1558 ntBASIC20.17■□□□□ 0.82
NXF3Q9H4D5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NXF3Q9H4D5 KRT18P56-201ENST00000507275 550 ntBASIC20.16■□□□□ 0.82
NXF3Q9H4D5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms