Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC38A1Q9H2H9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 ABHD17AP1-201ENST00000358206 933 ntBASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 DGCR10-201ENST00000609839 495 ntBASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 AL390961.4-201ENST00000623958 2535 ntBASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC38A1Q9H2H9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 AL354751.1-201ENST00000412768 1863 ntBASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC38A1Q9H2H9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 AC008622.2-201ENST00000617006 1229 ntBASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 AL049637.2-201ENST00000641778 930 ntBASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A1Q9H2H9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 AC079598.2-202ENST00000546624 1451 ntBASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 KRT8P45-201ENST00000414328 1447 ntBASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms