Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 AC012618.2-201ENST00000428058 849 ntBASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 AC135776.1-201ENST00000319817 2481 ntBASIC19.41■□□□□ 0.7
HERPUD2Q9BSE4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 FAM197Y1-201ENST00000421178 764 ntBASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 AL353807.1-201ENST00000427475 662 ntBASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 PCDHB18P-201ENST00000524813 2368 ntBASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HERPUD2Q9BSE4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HERPUD2Q9BSE4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HERPUD2Q9BSE4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HERPUD2Q9BSE4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HERPUD2Q9BSE4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.39■□□□□ 0.7
HERPUD2Q9BSE4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 FAM207BP-201ENST00000447172 505 ntBASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 KRT8P45-201ENST00000414328 1447 ntBASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HERPUD2Q9BSE4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 AC233702.5-201ENST00000584107 538 ntBASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 Z99916.2-201ENST00000604037 246 ntBASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 AP001412.1-201ENST00000608405 714 ntBASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 AC008556.1-201ENST00000610908 2040 ntBASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HERPUD2Q9BSE4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HERPUD2Q9BSE4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms