Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDCA3Q99618 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.45■□□□□ 0.7
CDCA3Q99618 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.45■□□□□ 0.7
CDCA3Q99618 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDCA3Q99618 AC106730.1-201ENST00000566722 1090 ntBASIC19.45■□□□□ 0.7
CDCA3Q99618 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.45■□□□□ 0.7
CDCA3Q99618 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.45■□□□□ 0.7
CDCA3Q99618 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.45■□□□□ 0.7
CDCA3Q99618 BNIP3P18-201ENST00000593976 575 ntBASIC19.45■□□□□ 0.7
CDCA3Q99618 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.45■□□□□ 0.7
CDCA3Q99618 AC114341.1-201ENST00000618070 349 ntBASIC19.45■□□□□ 0.7
CDCA3Q99618 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDCA3Q99618 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDCA3Q99618 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.44■□□□□ 0.7
CDCA3Q99618 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.44■□□□□ 0.7
CDCA3Q99618 SLC25A1P1-201ENST00000528351 927 ntBASIC19.44■□□□□ 0.7
CDCA3Q99618 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.44■□□□□ 0.7
CDCA3Q99618 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.44■□□□□ 0.7
CDCA3Q99618 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.44■□□□□ 0.7
CDCA3Q99618 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.44■□□□□ 0.7
CDCA3Q99618 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CDCA3Q99618 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDCA3Q99618 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.44■□□□□ 0.7
CDCA3Q99618 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDCA3Q99618 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDCA3Q99618 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDCA3Q99618 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDCA3Q99618 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
CDCA3Q99618 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDCA3Q99618 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.43■□□□□ 0.7
CDCA3Q99618 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CDCA3Q99618 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDCA3Q99618 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CDCA3Q99618 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.43■□□□□ 0.7
CDCA3Q99618 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.43■□□□□ 0.7
CDCA3Q99618 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.43■□□□□ 0.7
CDCA3Q99618 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.43■□□□□ 0.7
CDCA3Q99618 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.43■□□□□ 0.7
CDCA3Q99618 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.43■□□□□ 0.7
CDCA3Q99618 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.43■□□□□ 0.7
CDCA3Q99618 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
CDCA3Q99618 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.43■□□□□ 0.7
CDCA3Q99618 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CDCA3Q99618 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDCA3Q99618 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDCA3Q99618 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDCA3Q99618 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
CDCA3Q99618 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.42■□□□□ 0.7
CDCA3Q99618 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CDCA3Q99618 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.42■□□□□ 0.7
CDCA3Q99618 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CDCA3Q99618 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.42■□□□□ 0.7
CDCA3Q99618 AC008608.2-201ENST00000606089 416 ntBASIC19.42■□□□□ 0.7
CDCA3Q99618 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDCA3Q99618 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.42■□□□□ 0.7
CDCA3Q99618 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDCA3Q99618 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.42■□□□□ 0.7
CDCA3Q99618 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.42■□□□□ 0.7
CDCA3Q99618 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDCA3Q99618 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.41■□□□□ 0.7
CDCA3Q99618 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDCA3Q99618 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDCA3Q99618 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.41■□□□□ 0.7
CDCA3Q99618 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDCA3Q99618 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDCA3Q99618 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDCA3Q99618 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDCA3Q99618 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDCA3Q99618 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDCA3Q99618 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.41■□□□□ 0.7
CDCA3Q99618 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDCA3Q99618 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms