Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL138966.2-201ENST00000621997 464 ntBASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 CR769767.2-201ENST00000622735 460 ntBASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTCHD1Q96NR3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 KRT8P32-201ENST00000512863 1461 ntBASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 AL020996.1-203ENST00000536896 2307 ntBASIC17.63■□□□□ 0.41
PTCHD1Q96NR3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 MIR3180-5-201ENST00000583743 153 ntBASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTCHD1Q96NR3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTCHD1Q96NR3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms