Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 IGHGP-201ENST00000390555 1178 ntBASIC19.86■□□□□ 0.77
ZNF558Q96NG5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AC009078.2-202ENST00000463353 338 ntBASIC19.86■□□□□ 0.77
ZNF558Q96NG5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AC009065.1-201ENST00000564055 1225 ntBASIC19.86■□□□□ 0.77
ZNF558Q96NG5 Z69720.1-201ENST00000601483 472 ntBASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AC024563.2-201ENST00000603282 481 ntBASIC19.86■□□□□ 0.77
ZNF558Q96NG5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF558Q96NG5 AC125437.2-201ENST00000625180 2167 ntBASIC19.85■□□□□ 0.77
ZNF558Q96NG5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 LINC00167-201ENST00000530583 1419 ntBASIC19.85■□□□□ 0.77
ZNF558Q96NG5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 AL160237.2-201ENST00000556165 472 ntBASIC19.85■□□□□ 0.77
ZNF558Q96NG5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF558Q96NG5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 GUSBP12-201ENST00000513727 720 ntBASIC19.84■□□□□ 0.77
ZNF558Q96NG5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 AC104692.2-201ENST00000603054 253 ntBASIC19.84■□□□□ 0.77
ZNF558Q96NG5 AL592071.1-201ENST00000611956 408 ntBASIC19.84■□□□□ 0.77
ZNF558Q96NG5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
ZNF558Q96NG5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 AC141586.3-201ENST00000562166 1838 ntBASIC19.83■□□□□ 0.77
ZNF558Q96NG5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 AC079781.3-201ENST00000449110 356 ntBASIC19.83■□□□□ 0.77
ZNF558Q96NG5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 AC099336.1-202ENST00000602961 463 ntBASIC19.83■□□□□ 0.77
ZNF558Q96NG5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF558Q96NG5 AC068587.9-201ENST00000641814 219 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms