Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 HCG4P8-203ENST00000443049 980 ntBASIC21.81■■□□□ 1.08
CCDC17Q96LX7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 AL121672.3-201ENST00000608644 468 ntBASIC21.81■■□□□ 1.08
CCDC17Q96LX7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC17Q96LX7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 AP000593.1-201ENST00000393668 712 ntBASIC21.8■■□□□ 1.08
CCDC17Q96LX7 BX276092.5-203ENST00000456199 560 ntBASIC21.8■■□□□ 1.08
CCDC17Q96LX7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 NPAP1P7-201ENST00000613027 823 ntBASIC21.8■■□□□ 1.08
CCDC17Q96LX7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC17Q96LX7 KRT8P50-201ENST00000562022 1438 ntBASIC21.8■■□□□ 1.08
CCDC17Q96LX7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 AC016734.2-201ENST00000624325 1377 ntBASIC21.79■■□□□ 1.08
CCDC17Q96LX7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 KRT8P26-201ENST00000534154 1276 ntBASIC21.79■■□□□ 1.08
CCDC17Q96LX7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 AIRN-201ENST00000601203 4374 ntBASIC21.79■■□□□ 1.08
CCDC17Q96LX7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC17Q96LX7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 TSSC2-201ENST00000450217 709 ntBASIC21.78■■□□□ 1.08
CCDC17Q96LX7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC17Q96LX7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC17Q96LX7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms