Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 AL157384.1-201ENST00000445995 2473 ntBASIC15.84■□□□□ 0.13
SPG11Q96JI7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 PMS2P2-201ENST00000425039 1128 ntBASIC15.84■□□□□ 0.13
SPG11Q96JI7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SPG11Q96JI7 AC073648.2-201ENST00000510116 352 ntBASIC15.84■□□□□ 0.13
SPG11Q96JI7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SPG11Q96JI7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPG11Q96JI7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.83■□□□□ 0.13
SPG11Q96JI7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.83■□□□□ 0.13
SPG11Q96JI7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SPG11Q96JI7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPG11Q96JI7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SPG11Q96JI7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 AC010240.3-201ENST00000607688 395 ntBASIC15.83■□□□□ 0.12
SPG11Q96JI7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SPG11Q96JI7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SPG11Q96JI7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.82■□□□□ 0.12
SPG11Q96JI7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SPG11Q96JI7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SPG11Q96JI7 AL035633.1-201ENST00000406139 838 ntBASIC15.82■□□□□ 0.12
SPG11Q96JI7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.82■□□□□ 0.12
SPG11Q96JI7 HNRNPDP1-201ENST00000439535 754 ntBASIC15.82■□□□□ 0.12
SPG11Q96JI7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms