Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXRED1Q96CU9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 POU5F1P3-201ENST00000428824 1078 ntBASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 TSPY23P-201ENST00000440136 739 ntBASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 SOX15-203ENST00000570788 1093 ntBASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 AP000997.3-201ENST00000623333 2250 ntBASIC16.28■□□□□ 0.2
FOXRED1Q96CU9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 HEIH-201ENST00000623091 1652 ntBASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 ESRRAP1-201ENST00000400596 1257 ntBASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 AC026366.1-201ENST00000488803 879 ntBASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXRED1Q96CU9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 AC126763.1-201ENST00000552015 2118 ntBASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FOXRED1Q96CU9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms