Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 CRYGFP-201ENST00000418459 633 ntBASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 AL109659.2-201ENST00000606809 1674 ntBASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.24■□□□□ 0.51
RHBDF1Q96CC6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 AC073592.3-201ENST00000625118 1834 ntBASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 LETM1P2-201ENST00000597330 2178 ntBASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 TSPY7P-201ENST00000431358 1114 ntBASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 CA15P1-201ENST00000481698 905 ntBASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RHBDF1Q96CC6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 AP005242.2-201ENST00000580065 1175 ntBASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 AP006294.2-201ENST00000641667 209 ntBASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 AC008556.1-201ENST00000610908 2040 ntBASIC18.22■□□□□ 0.51
RHBDF1Q96CC6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 RBM17P1-201ENST00000453646 1190 ntBASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.21■□□□□ 0.51
RHBDF1Q96CC6 MIR4785-201ENST00000585005 73 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms