Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPGEF4Q8WZA2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 FP475955.4-201ENST00000623131 1990 ntBASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 AC024563.2-201ENST00000603282 481 ntBASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPGEF4Q8WZA2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 AC099336.1-202ENST00000602961 463 ntBASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 AL592071.1-201ENST00000611956 408 ntBASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 GXYLT1P4-201ENST00000613576 1192 ntBASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 PCDHAC2-203ENST00000615316 3011 ntBASIC24.5■■□□□ 1.51
RAPGEF4Q8WZA2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 BMF-207ENST00000559701 630 ntTSL 3 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.49■■□□□ 1.51
RAPGEF4Q8WZA2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 GUSBP12-201ENST00000513727 720 ntBASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 AC124864.1-201ENST00000623408 392 ntBASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 AC068587.9-201ENST00000641814 219 ntBASIC24.48■■□□□ 1.51
RAPGEF4Q8WZA2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.47■■□□□ 1.51
RAPGEF4Q8WZA2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms