Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 RBM17P1-201ENST00000453646 1190 ntBASIC18.28■□□□□ 0.52
ATL1Q8WXF7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 MIR4497-201ENST00000583208 89 ntBASIC18.28■□□□□ 0.52
ATL1Q8WXF7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATL1Q8WXF7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATL1Q8WXF7 RCC2P3-201ENST00000418112 1537 ntBASIC18.27■□□□□ 0.51
ATL1Q8WXF7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ATL1Q8WXF7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATL1Q8WXF7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATL1Q8WXF7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATL1Q8WXF7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.27■□□□□ 0.51
ATL1Q8WXF7 ANO7L1-203ENST00000602586 1720 ntBASIC18.26■□□□□ 0.51
ATL1Q8WXF7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.26■□□□□ 0.51
ATL1Q8WXF7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 AC005082.1-201ENST00000413042 2259 ntBASIC18.25■□□□□ 0.51
ATL1Q8WXF7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 SLC25A1P2-201ENST00000430693 912 ntBASIC18.25■□□□□ 0.51
ATL1Q8WXF7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 MYC-208ENST00000641036 567 ntBASIC18.25■□□□□ 0.51
ATL1Q8WXF7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 AL109659.2-201ENST00000606809 1674 ntBASIC18.25■□□□□ 0.51
ATL1Q8WXF7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ATL1Q8WXF7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATL1Q8WXF7 NEFHP1-201ENST00000412845 2629 ntBASIC18.24■□□□□ 0.51
ATL1Q8WXF7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms