Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 AL138966.2-201ENST00000621997 464 ntBASIC19.64■□□□□ 0.73
RNF139Q8WU17 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 RCC2P3-201ENST00000418112 1537 ntBASIC19.64■□□□□ 0.73
RNF139Q8WU17 BCL2-203ENST00000589955 5011 ntBASIC19.64■□□□□ 0.73
RNF139Q8WU17 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF139Q8WU17 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF139Q8WU17 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF139Q8WU17 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
RNF139Q8WU17 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF139Q8WU17 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF139Q8WU17 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF139Q8WU17 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 CR769767.2-201ENST00000622735 460 ntBASIC19.63■□□□□ 0.73
RNF139Q8WU17 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RNF139Q8WU17 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF139Q8WU17 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
RNF139Q8WU17 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 MIR3180-5-201ENST00000583743 153 ntBASIC19.62■□□□□ 0.73
RNF139Q8WU17 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
RNF139Q8WU17 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF139Q8WU17 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 KRT8P32-201ENST00000512863 1461 ntBASIC19.61■□□□□ 0.73
RNF139Q8WU17 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 COX11P1-201ENST00000489116 835 ntBASIC19.61■□□□□ 0.73
RNF139Q8WU17 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF139Q8WU17 AC036111.1-201ENST00000533973 1582 ntBASIC19.61■□□□□ 0.73
RNF139Q8WU17 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF139Q8WU17 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF139Q8WU17 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF139Q8WU17 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms