Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SH3RF2Q8TEC5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SH3RF2Q8TEC5 AC141586.3-201ENST00000562166 1838 ntBASIC19.39■□□□□ 0.7
SH3RF2Q8TEC5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SH3RF2Q8TEC5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.39■□□□□ 0.7
SH3RF2Q8TEC5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 AC098818.2-201ENST00000564925 2320 ntBASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3RF2Q8TEC5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 KRT18P23-201ENST00000435622 1283 ntBASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 AC079602.3-201ENST00000623931 403 ntBASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.38■□□□□ 0.69
SH3RF2Q8TEC5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 FP475955.4-201ENST00000623131 1990 ntBASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 KRT8P32-201ENST00000512863 1461 ntBASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 KRT18P48-201ENST00000434763 852 ntBASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 MIR3917-201ENST00000580971 93 ntBASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3RF2Q8TEC5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms