Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SLC25A1P2-201ENST00000430693 912 ntBASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 AC073912.3-201ENST00000624414 853 ntBASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCLL1Q8TB92 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 TSPY14P-201ENST00000303979 915 ntBASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCLL1Q8TB92 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 KRT8P3-201ENST00000519669 1449 ntBASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 C2orf69P3-201ENST00000565542 1120 ntBASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 AL023803.3-201ENST00000615559 522 ntBASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGCLL1Q8TB92 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 KRT8P9-201ENST00000558927 1449 ntBASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 AC087499.1-201ENST00000418141 1075 ntBASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 EGLN1P1-201ENST00000531623 762 ntBASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
HMGCLL1Q8TB92 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms