Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIK3C3Q8NEB9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIK3C3Q8NEB9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.56■□□□□ 0.4
PIK3C3Q8NEB9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PIK3C3Q8NEB9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
PIK3C3Q8NEB9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.56■□□□□ 0.4
PIK3C3Q8NEB9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 AC073592.3-201ENST00000625118 1834 ntBASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 AC139713.2-201ENST00000641328 2723 ntBASIC17.55■□□□□ 0.4
PIK3C3Q8NEB9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 AP003097.1-201ENST00000530657 1135 ntBASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PIK3C3Q8NEB9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 CD99P1-205ENST00000527459 561 ntBASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 AL162741.1-201ENST00000565563 1558 ntBASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PIK3C3Q8NEB9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms