Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC090616.6-201ENST00000582640 721 ntBASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 AL109659.2-201ENST00000606809 1674 ntBASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYNPOQ8N3V7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 HOXB1-202ENST00000577092 1414 ntBASIC19■□□□□ 0.63
SYNPOQ8N3V7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 PVRIG2P-201ENST00000435460 978 ntBASIC19■□□□□ 0.63
SYNPOQ8N3V7 LINC00265-3P-201ENST00000447588 903 ntBASIC19■□□□□ 0.63
SYNPOQ8N3V7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 AP000867.3-201ENST00000524675 377 ntBASIC19■□□□□ 0.63
SYNPOQ8N3V7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPOQ8N3V7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19■□□□□ 0.63
SYNPOQ8N3V7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 AC125437.2-201ENST00000625180 2167 ntBASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 EMBP1-201ENST00000458200 901 ntBASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 AC104390.1-201ENST00000555663 520 ntBASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 AC104692.2-201ENST00000603054 253 ntBASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SYNPOQ8N3V7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 RNF126P1-202ENST00000569893 925 ntBASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPOQ8N3V7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPOQ8N3V7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms