Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 STARP1-201ENST00000397973 869 ntBASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
SCN4BQ8IWT1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 KRT18P23-201ENST00000435622 1283 ntBASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 SLC25A24-204ENST00000569674 2357 ntBASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN4BQ8IWT1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 AC034232.1-201ENST00000506026 1064 ntBASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN4BQ8IWT1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 MIR564-202ENST00000385049 94 ntBASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 RASA4DP-201ENST00000460726 1199 ntBASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN4BQ8IWT1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 LINC01311-201ENST00000565162 1445 ntBASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 SEC1P-202ENST00000473944 940 ntBASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 AL121956.5-201ENST00000625261 221 ntBASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms