Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 EFS-203ENST00000429593 2610 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 IGHGP-201ENST00000390555 1178 ntBASIC13.01□□□□□ -0.33
CSMD3Q7Z407 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 AL512353.2-201ENST00000448759 1962 ntBASIC13.01□□□□□ -0.33
CSMD3Q7Z407 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSMD3Q7Z407 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13□□□□□ -0.33
CSMD3Q7Z407 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13□□□□□ -0.33
CSMD3Q7Z407 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 HOXB1-202ENST00000577092 1414 ntBASIC13□□□□□ -0.33
CSMD3Q7Z407 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 AC012640.2-201ENST00000561606 901 ntBASIC13□□□□□ -0.33
CSMD3Q7Z407 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
CSMD3Q7Z407 AC124864.1-201ENST00000623408 392 ntBASIC13□□□□□ -0.33
CSMD3Q7Z407 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CSMD3Q7Z407 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13□□□□□ -0.33
CSMD3Q7Z407 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13□□□□□ -0.33
CSMD3Q7Z407 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13□□□□□ -0.33
CSMD3Q7Z407 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13□□□□□ -0.33
CSMD3Q7Z407 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
CSMD3Q7Z407 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13□□□□□ -0.33
CSMD3Q7Z407 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13□□□□□ -0.33
CSMD3Q7Z407 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSMD3Q7Z407 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 AC027601.4-201ENST00000611259 610 ntBASIC12.99□□□□□ -0.33
CSMD3Q7Z407 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 GPR32P1-201ENST00000601788 811 ntBASIC12.99□□□□□ -0.33
CSMD3Q7Z407 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CSMD3Q7Z407 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 AL109659.2-201ENST00000606809 1674 ntBASIC12.98□□□□□ -0.33
CSMD3Q7Z407 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSMD3Q7Z407 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms