Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 AC009947.2-201ENST00000444014 672 ntBASIC17.94■□□□□ 0.46
RNF44Q7L0R7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 NEK4P2-201ENST00000580004 1012 ntBASIC17.94■□□□□ 0.46
RNF44Q7L0R7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 AC006011.2-201ENST00000621313 1158 ntBASIC17.94■□□□□ 0.46
RNF44Q7L0R7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF44Q7L0R7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 HEIH-201ENST00000623091 1652 ntBASIC17.93■□□□□ 0.46
RNF44Q7L0R7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF44Q7L0R7 AC008556.1-201ENST00000610908 2040 ntBASIC17.93■□□□□ 0.46
RNF44Q7L0R7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 AP000523.1-201ENST00000398242 1049 ntBASIC17.92■□□□□ 0.46
RNF44Q7L0R7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF44Q7L0R7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms