Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 AL158047.1-201ENST00000445918 881 ntBASIC21.14■□□□□ 0.97
SHC4Q6S5L8 AC107956.1-201ENST00000494359 873 ntBASIC21.14■□□□□ 0.97
SHC4Q6S5L8 NUDT16P1-203ENST00000513809 620 ntBASIC21.14■□□□□ 0.97
SHC4Q6S5L8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 AC113410.3-201ENST00000623366 203 ntBASIC21.14■□□□□ 0.97
SHC4Q6S5L8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 AL109659.2-201ENST00000606809 1674 ntBASIC21.13■□□□□ 0.97
SHC4Q6S5L8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHC4Q6S5L8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 AC112777.1-201ENST00000540175 1423 ntBASIC21.12■□□□□ 0.97
SHC4Q6S5L8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 ABHD17AP1-201ENST00000358206 933 ntBASIC21.12■□□□□ 0.97
SHC4Q6S5L8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHC4Q6S5L8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 AC233702.5-201ENST00000584107 538 ntBASIC21.11■□□□□ 0.97
SHC4Q6S5L8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SHC4Q6S5L8 AL162741.1-201ENST00000565563 1558 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 AC135776.1-201ENST00000319817 2481 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 GPAT2P1-201ENST00000444924 1672 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 AL023284.2-201ENST00000405850 579 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 MFAP1P1-201ENST00000442257 1255 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 UBE2SP1-201ENST00000450587 669 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
SHC4Q6S5L8 DGCR10-201ENST00000609839 495 ntBASIC21.1■□□□□ 0.97
SHC4Q6S5L8 REXO1L10P-201ENST00000615707 1290 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms