Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 NTF6G-201ENST00000591094 616 ntBASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 MIR2861-201ENST00000636310 90 ntBASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TMEM88Q6PEY1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 CROCCP2-202ENST00000412962 2773 ntBASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM88Q6PEY1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM88Q6PEY1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms