Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.99■□□□□ 0.95
COL13A1Q5TAT6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 LAGE3P1-201ENST00000425356 484 ntBASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 CRB3P1-201ENST00000449338 276 ntBASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 AL596325.1-201ENST00000563991 1082 ntBASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 AL139288.1-201ENST00000623748 933 ntBASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL13A1Q5TAT6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 FAM207CP-201ENST00000443486 507 ntBASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 AC079834.2-201ENST00000609776 1949 ntBASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL13A1Q5TAT6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AC004461.1-201ENST00000412461 403 ntBASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 COX5BP8-201ENST00000416911 349 ntBASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AL513210.1-201ENST00000629608 234 ntBASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
COL13A1Q5TAT6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
COL13A1Q5TAT6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 AC055876.3-201ENST00000431496 288 ntBASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 AC027307.3-201ENST00000594262 1100 ntBASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 AC138649.4-201ENST00000612222 287 ntBASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 AC025048.6-201ENST00000634326 1161 ntBASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 AC068587.10-201ENST00000641210 219 ntBASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
COL13A1Q5TAT6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL13A1Q5TAT6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms