Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.24■□□□□ 0.67
ALFQ53S48 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ALFQ53S48 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.24■□□□□ 0.67
ALFQ53S48 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ALFQ53S48 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ALFQ53S48 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ALFQ53S48 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
ALFQ53S48 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ALFQ53S48 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 MIR564-202ENST00000385049 94 ntBASIC19.23■□□□□ 0.67
ALFQ53S48 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.23■□□□□ 0.67
ALFQ53S48 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.23■□□□□ 0.67
ALFQ53S48 AC018445.3-201ENST00000624177 1945 ntBASIC19.23■□□□□ 0.67
ALFQ53S48 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALFQ53S48 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.23■□□□□ 0.67
ALFQ53S48 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALFQ53S48 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.22■□□□□ 0.67
ALFQ53S48 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALFQ53S48 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ALFQ53S48 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.22■□□□□ 0.67
ALFQ53S48 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.22■□□□□ 0.67
ALFQ53S48 COX11P1-201ENST00000489116 835 ntBASIC19.22■□□□□ 0.67
ALFQ53S48 YBX1P2-201ENST00000489612 999 ntBASIC19.22■□□□□ 0.67
ALFQ53S48 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ALFQ53S48 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALFQ53S48 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALFQ53S48 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALFQ53S48 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
ALFQ53S48 AC120498.9-201ENST00000339021 3867 ntBASIC19.22■□□□□ 0.67
ALFQ53S48 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALFQ53S48 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALFQ53S48 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.21■□□□□ 0.67
ALFQ53S48 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.21■□□□□ 0.67
ALFQ53S48 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
ALFQ53S48 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.21■□□□□ 0.67
ALFQ53S48 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.21■□□□□ 0.67
ALFQ53S48 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.21■□□□□ 0.67
ALFQ53S48 AL441883.1-201ENST00000566170 1045 ntBASIC19.21■□□□□ 0.67
ALFQ53S48 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.21■□□□□ 0.67
ALFQ53S48 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.21■□□□□ 0.67
ALFQ53S48 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.21■□□□□ 0.67
ALFQ53S48 AC011558.1-201ENST00000623459 338 ntBASIC19.21■□□□□ 0.67
ALFQ53S48 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.21■□□□□ 0.67
ALFQ53S48 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
ALFQ53S48 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALFQ53S48 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALFQ53S48 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.2■□□□□ 0.66
ALFQ53S48 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALFQ53S48 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ALFQ53S48 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALFQ53S48 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALFQ53S48 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.2■□□□□ 0.66
ALFQ53S48 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALFQ53S48 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.2■□□□□ 0.66
ALFQ53S48 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.2■□□□□ 0.66
ALFQ53S48 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALFQ53S48 DUX4L26-201ENST00000489078 1255 ntBASIC19.2■□□□□ 0.66
ALFQ53S48 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALFQ53S48 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.2■□□□□ 0.66
ALFQ53S48 NEK4P2-201ENST00000580004 1012 ntBASIC19.2■□□□□ 0.66
ALFQ53S48 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.2■□□□□ 0.66
ALFQ53S48 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ALFQ53S48 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALFQ53S48 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALFQ53S48 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms