Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.55■□□□□ 0.88
KCNA1Q09470 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KCNA1Q09470 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KCNA1Q09470 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 KRT18P22-201ENST00000402024 1347 ntBASIC20.54■□□□□ 0.88
KCNA1Q09470 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
KCNA1Q09470 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.54■□□□□ 0.88
KCNA1Q09470 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
KCNA1Q09470 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNA1Q09470 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KCNA1Q09470 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
KCNA1Q09470 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.54■□□□□ 0.88
KCNA1Q09470 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KCNA1Q09470 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.54■□□□□ 0.88
KCNA1Q09470 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KCNA1Q09470 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KCNA1Q09470 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 AC126763.1-201ENST00000552015 2118 ntBASIC20.53■□□□□ 0.88
KCNA1Q09470 AC099343.3-201ENST00000605834 2503 ntBASIC20.53■□□□□ 0.88
KCNA1Q09470 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 MIR564-202ENST00000385049 94 ntBASIC20.53■□□□□ 0.88
KCNA1Q09470 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 ECEL1P3-201ENST00000427961 737 ntBASIC20.53■□□□□ 0.88
KCNA1Q09470 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.53■□□□□ 0.88
KCNA1Q09470 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KCNA1Q09470 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KCNA1Q09470 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA1Q09470 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA1Q09470 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA1Q09470 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.52■□□□□ 0.88
KCNA1Q09470 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA1Q09470 AC010203.1-204ENST00000548782 407 ntBASIC20.52■□□□□ 0.88
KCNA1Q09470 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
KCNA1Q09470 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.52■□□□□ 0.88
KCNA1Q09470 MIR3180-5-201ENST00000583743 153 ntBASIC20.52■□□□□ 0.88
KCNA1Q09470 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KCNA1Q09470 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA1Q09470 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA1Q09470 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
KCNA1Q09470 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KCNA1Q09470 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA1Q09470 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA1Q09470 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
KCNA1Q09470 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA1Q09470 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNA1Q09470 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNA1Q09470 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.51■□□□□ 0.87
KCNA1Q09470 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNA1Q09470 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA1Q09470 AC009113.1-201ENST00000570267 2443 ntBASIC20.51■□□□□ 0.87
KCNA1Q09470 SLC25A3P1-201ENST00000443844 931 ntBASIC20.51■□□□□ 0.87
KCNA1Q09470 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNA1Q09470 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KCNA1Q09470 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.51■□□□□ 0.87
KCNA1Q09470 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms