Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 AL121761.2-201ENST00000598007 1648 ntBASIC19.62■□□□□ 0.73
CBX1P83916 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CBX1P83916 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX1P83916 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CBX1P83916 AC023824.1-201ENST00000562945 2975 ntBASIC19.62■□□□□ 0.73
CBX1P83916 PCDHA14-201ENST00000506751 2298 ntBASIC19.62■□□□□ 0.73
CBX1P83916 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 AC132872.4-202ENST00000622924 2756 ntBASIC19.61■□□□□ 0.73
CBX1P83916 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX1P83916 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.61■□□□□ 0.73
CBX1P83916 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.61■□□□□ 0.73
CBX1P83916 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CBX1P83916 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX1P83916 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CBX1P83916 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX1P83916 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.61■□□□□ 0.73
CBX1P83916 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.61■□□□□ 0.73
CBX1P83916 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 LINC00602-201ENST00000629776 2065 ntBASIC19.61■□□□□ 0.73
CBX1P83916 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CBX1P83916 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CBX1P83916 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CBX1P83916 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.61■□□□□ 0.73
CBX1P83916 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 PCDHB17P-201ENST00000539533 2393 ntBASIC19.6■□□□□ 0.73
CBX1P83916 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CBX1P83916 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.6■□□□□ 0.73
CBX1P83916 AL117332.1-201ENST00000622628 974 ntBASIC19.6■□□□□ 0.73
CBX1P83916 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.6■□□□□ 0.73
CBX1P83916 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CBX1P83916 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX1P83916 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.59■□□□□ 0.73
CBX1P83916 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.59■□□□□ 0.73
CBX1P83916 AL023806.1-201ENST00000603994 1649 ntBASIC19.59■□□□□ 0.73
CBX1P83916 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CBX1P83916 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.59■□□□□ 0.73
CBX1P83916 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CBX1P83916 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.59■□□□□ 0.73
CBX1P83916 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.59■□□□□ 0.73
CBX1P83916 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CBX1P83916 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.59■□□□□ 0.73
CBX1P83916 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.59■□□□□ 0.73
CBX1P83916 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX1P83916 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms