Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.03■□□□□ -0
PAX9P55771 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.03■□□□□ -0
PAX9P55771 AL160286.2-201ENST00000567150 934 ntBASIC15.03■□□□□ -0
PAX9P55771 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PAX9P55771 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PAX9P55771 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.03■□□□□ -0
PAX9P55771 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.03■□□□□ -0
PAX9P55771 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.03■□□□□ -0
PAX9P55771 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.03■□□□□ -0
PAX9P55771 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PAX9P55771 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.02■□□□□ -0
PAX9P55771 PCDHA12-202ENST00000613593 2588 ntBASIC15.02■□□□□ -0
PAX9P55771 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
PAX9P55771 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PAX9P55771 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PAX9P55771 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
PAX9P55771 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
PAX9P55771 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.02■□□□□ -0
PAX9P55771 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PAX9P55771 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PAX9P55771 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PAX9P55771 AC004911.1-201ENST00000416316 871 ntBASIC15.02■□□□□ -0
PAX9P55771 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.02■□□□□ -0
PAX9P55771 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.02■□□□□ -0
PAX9P55771 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.02■□□□□ -0
PAX9P55771 AC080038.1-201ENST00000611274 1154 ntBASIC15.02■□□□□ -0
PAX9P55771 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.02■□□□□ -0
PAX9P55771 AL121829.2-201ENST00000620908 328 ntBASIC15.02■□□□□ -0
PAX9P55771 MYC-208ENST00000641036 567 ntBASIC15.02■□□□□ -0
PAX9P55771 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PAX9P55771 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PAX9P55771 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.02□□□□□ -0.01
PAX9P55771 REXO1L9P-201ENST00000604264 2108 ntBASIC15.02□□□□□ -0.01
PAX9P55771 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PAX9P55771 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.02□□□□□ -0.01
PAX9P55771 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PAX9P55771 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.02□□□□□ -0.01
PAX9P55771 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.02□□□□□ -0.01
PAX9P55771 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PAX9P55771 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.01□□□□□ -0.01
PAX9P55771 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 AC112777.1-201ENST00000540175 1423 ntBASIC15.01□□□□□ -0.01
PAX9P55771 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
PAX9P55771 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PAX9P55771 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.01□□□□□ -0.01
PAX9P55771 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.01□□□□□ -0.01
PAX9P55771 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.01□□□□□ -0.01
PAX9P55771 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.01□□□□□ -0.01
PAX9P55771 AC105036.2-201ENST00000569468 176 ntBASIC15.01□□□□□ -0.01
PAX9P55771 AC073111.5-205ENST00000641717 521 ntBASIC15.01□□□□□ -0.01
PAX9P55771 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 KRT8P32-201ENST00000512863 1461 ntBASIC15.01□□□□□ -0.01
PAX9P55771 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PAX9P55771 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PAX9P55771 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15□□□□□ -0.01
PAX9P55771 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
PAX9P55771 KRT8P45-201ENST00000414328 1447 ntBASIC15□□□□□ -0.01
PAX9P55771 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15□□□□□ -0.01
PAX9P55771 AC008556.1-201ENST00000610908 2040 ntBASIC15□□□□□ -0.01
PAX9P55771 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PAX9P55771 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PAX9P55771 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PAX9P55771 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15□□□□□ -0.01
PAX9P55771 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15□□□□□ -0.01
PAX9P55771 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15□□□□□ -0.01
PAX9P55771 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PAX9P55771 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms